Software and Database

CAMDA

The Concurrence of Active Methylation and DemethylAtion - an unappreciated source of DNA methylation polymorphism.

Paper Nature Communications, Sep 2021

Code GitHub release

CAMDA

CHALM

Cellular Heterogeneity – Adjusted cLonal Methylation improves the gene expression prediction power of DNA methylation.

Paper Nature Communications, Jan 2021

Code GitHub release

CHALM

PopCanyon

Population - Canyon analyzer discovers the Under-Methylated Regions(UMR/Canyon) in population study.

Paper Genome Biology, 2018

Code GitHub release

PopCanyon

CORM

The Clustering Of Regression Models method groups genes that share a similar relationship to the covariates. It provides a unified approach for both cross-sectional data and time course data.

Paper Cancer Informatics, 2014

Code CRAN release

CORM